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植物分子遗传国家重点实验室

国家植物基因研究中心(上海)

中国科学院国家基因研究中心

中国科学院合成生物学重点实验室

中国科学院昆虫发育与进化生物学重点实验室
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  1. Shao YY, Lu N, Wu ZF, Cai C, Wang SS, Zhang LL, Xiao SJ, Liu L, Zeng XF, Zheng HJ, Yang C, Zhao ZH, Zhao GP*, Zhou JQ*, Xue XL*, Qin ZJ* (2018). Creating a functionalsingle-chromosome yeast. Nature, 60(7718):331-335
  2. Li SY, Cheng QX, Liu JK, Nie XQ, Zhao GP, Wang J* (2018). CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNA. Cell Res, 28(4):491-493
  3. Hao Zhang, Yujie Liu, Xiaoqun Nie, Lixia Liu, Qiang Hua, Guo-Ping Zhao, Chen Yang* (2018). The cyanobacterial ornithine–ammonia cycle involves an arginine dihydrolase. Nature Chemical Biology, 14:575-581
  4. Feifei Qi#, Chao Lei#, Fengwei Li, Xingwang Zhang, Jin Wang, Wei Zhang, Zhen Fan, Weichao Li, Gong-Li Tang, Youli Xiao*, Guoping Zhao, Shengying Li* (2018). Deciphering the late steps of rifamycin biosynthesis. Nat Commun, 9:2342
  5. Xinyun Jing, Bingran Xie, Longxian Chen, Niubing Zhang, Yiyi Jiang, Hang Qin, Hongbing Wang, Pei Hao*, Sheng Yang*, Xuan Li* (2018). Implementation of the CRISPR-Cas13a system in fission yeast and its repurposing for precise RNA editing. Nucleic AcidsResearch, 46(15):e90
  6. Xiaoxian Wu#, Diane L. Haakonsen#, Allen G. Sanderlin, Yue J, Liu, Liqiang Shen, Ningning Zhuang, Michael T. Laub*, Yu Zhang* (2018). Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA. Nucleic AcidsResearch, 46(6):3245-3256
  7. Yang YP, Nie XQ, Jiang YQ, Yang C*, Gu Y*, Jiang WH* (2018). Metabolic regulation in solventogenic clostridia: regulators, mechanisms and engineering. Biotechnol Adv, 36:905-914
  8. Fan XY, Tang BK, Xu YY, Han AX, Shi KX, Wu YK, Ye Y, Wei ML, Niu C, Wong KW, Zhao GP*, Lyu LD* (2018). Oxidation of dCTP contributes to antibiotic lethality in stationary-phase mycobacteria. PNAS, 115(9):2210-2215
  9. YuweiSun, ZhuoChen, JianxuLi, JianhuaLi, HuajunLv, Jingya Yang, Weiwei Li, Dingan Xie, Zhiqiang Xiong, Peng Zhang, Yong Wang* (2018). Diterpenoid UDP-glycosyltransferases from Chinese Sweet Tea and Ashitaba Complete the Biosynthesis of Rubusoside. Molecular Plant, 11(10):1308-1311
  10. Baofu Xu, Zhen Fan, Yongxing Lei, Yu Ping, Amit Jaisi, Youli Xiao* (2018). Insights into Pipecolic Acid Biosynthesis in Huperzia serrata. Org Lett, 20:2195-2198
  11. Yiqing Zhou, Weichao Li, Wenjing You, Zhengao Di, Mingli Wang, Haiyan Zhou, Shuguang Yuan, Nai-Kei Wong, Youli Xiao* (2018). Discovery of Arabidopsis UGT73C1 as a steviol-catalyzing UDP-glycosyltransferase with chemical probes. Chem Commun, 54:7179-7182
  12. Gen Zou, Yanping Jiang, Rui Liu, Zhihua Zhu, Zhihua Zhou* (2018). The putative β-glucosidase BGL3I regulates cellulase induction in Trichoderma reesei. Biotechnol Biofuels, in press
  13. Ping Chen, Xinyun Jing, JianRen, HanCao, Pei Hao, Xuan Li* (2018). Modelling BioNano optical data and simulation study of genome map assembly. Bioinformatics, doi: 10.1093/bioinformatics/bty456.
  14. Weichao Li#, Yiqing Zhou#, Wenjing You#, Mengquan Yang, Yanrong Ma, Mingli Wang, Yong Wang, Shuguang Yuan, Youli Xiao* (2018). Development of Photoaffinity Probe for the Discovery of Steviol Glycosides Biosynthesis Pathway in Stevia rebuadiana and Rapid Substrate Screening. ACSChem Biol, 13:1944-1949
  15. Weichao Li, Yiqing Zhou, Guanghui Tang, Nai-Kei Wong, Mengquan Yang, Dan Tan, Youli Xiao* (2018). Chemoproteomics Reveals the Antiproliferative Potential of Parkinson’s Disease Kinase Inhibitor LRRK2-IN-1 by Targeting PCNA Protein. Mol Pharmaceut, 15:3252-3259
  16. Li SY#, Cheng QX#, Wang JM, Li XY, Zhang ZL, Gao S, Cao RB, Zhao GP, Wang J* (2018). CRISPR-Cas12a-assisted nucleic acid detection. Cell Discov, 4:20
  17. Pingping Wang, Wei Wei, Wei Ye, Xiaodong Li, Wenfang Zhao, Chengshuai Yang, Chaojing Li, Xing Yan*, Zhihua Zhou* (2018). Synthesizing ginsenoside Rh2 in Saccharomyces cerevisiae cell factory at high-efficiency. Cell Discov, in press
  18. Chunyan Liu, Gen Zou, Xing Yan*, Xuguo Zhou* (2018). Screening of multimeric β-xylosidases from the gut microbiome of a higher termite, Globitermes brachycerastes. International Journal of Biological Sciences, 14 (6):608-615
  19. Yongjun Wei, Lei Zhang, Zhihua Zhou, Xing Yan* (2018). Diversity of Gene Clusters for Polyketide and Nonribosomal Peptide Biosynthesis Revealed by Metagenomic Analysis of the Yellow Sea Sediment. Frontiers in Microbiology, (9) 295:1-12
  20. Li Z, Liu X, Wang J, Wang Y, Zheng G, Lu Y, Zhao G, Wang J* (2018). Insight into the Molecular Mechanism of the Transcriptional Regulation of amtB Operon in Streptomyces coelicolor. Front Microbiol, 9:264
  21. Wang X, Yang JJ, Yang S*, Jiang Y* (2018). Unraveling the genetic basis of fast L-arabinose consumption on top of recombinant xylose-fermenting Saccharomyces cerevisiae. Biotechnol Bioeng, doi: 10.1002/bit.26827
  22. Lei C, Wang J, Liu Y, Liu X, Zhao G, Wang J* (2018). A feedback regulatory model for RifQ-mediated repression of rifamycin export in Amycolatopsis mediterranei. Microb Cell Fact, 17(1):14
  23. Sun J, Wang Q, Jiang Y, Wen ZQ, Yang LR, Wu JP*, Yang S* (2018). Genome editing and transcriptional repression in Pseudomonas putida KT2440 via the type II CRISPR system. Microbial cell factories, 17(1):41
  24. Cao Y, Cao R, Huang Y, Zhou H, Liu Y, Li X*, Zhong W*, Hao P* (2018). A comprehensive study on cellular RNA editing activity in response to infections with different subtypes of influenza A viruses. BMC Genomics, 19(Suppl 1):925
  25. Huang Y, Cao Y, Li J, Liu Y, Zhong W, Li X*, Chen C*, Hao P* (2018). A survey on cellular RNA editing activity in response to Candida albicans infections. BMC Genomics, 19(Suppl 1):43
  26. Zhang L, Liu Y, Yang Y, Jiang W*, Gu Y* (2018). A Novel Dual-cre Motif Enables Two-Way Autoregulation of CcpA in Clostridium acetobutylicum.. Applied and Environmental Microbiology, 84(8), pii: e00114-18
  27. Li L, Wei KK, Zheng GS, Liu XC, Chen SX, Jiang WH*, Lu YH* (2018). CRISPR-Cpf1-assisted multiplex genome editing and transcriptional repression in Streptomyces. Applied and Environmental Microbiology, 84(18), pii:e00827-18
  28. Sun BB, Yang JJ, Yang S*, Ye RD*, Chen DJ*, Jiang Y* (2018). A CRISPR-Cpf1-Assisted Non-Homologous End Joining Genome Editing System of Mycobacterium smegmatis. Biotechnology journal, doi:0.1002/biot. 201700588
  29. Yu Y, Tang B, Dai R, Zhang B, Chen L, Yang H, Zhao G*, Ding X* (2018). Identification of the streptothricin and tunicamycin biosynthetic gene clusters by genome mining in Streptomyces sp. strain fd1-xmd. Applied Microbiology and Biotechnology, 102(6):2621-2633
  30. Chengshuai Yang#, Weichao Li#, Chen Li#, Zhihua Zhou*, Youli Xiao*, Xing Yan* (2018). Metabolism of ganoderic acids by a Ganoderma lucidum cytochrome P450 and the 3-keto sterol reductase ERG27 from yeast. Phytochemistry, 155:83-92
  31. Lei X, Wang L, Zhao G*, Ding X* (2018). Site-specificity of serine integrase demonstrated by the attB sequence preference of ɸBT1 integrase. FEBS Lett, 592(8):1389-1399
  32. Yiqing Zhou, Youli Xiao* (2018). Target Identification of Bioactive Natural Products (活性天然产物靶标蛋白的鉴定). Acta Chimica Sinica, 76:177-189
  33. Zhang Y, Zhang Y, Li P, Wang Y, Wang J, Shao Z*, Zhao G* (2018). GlnR positive transcriptional regulation of the phosphate-specific transport system pstSCAB in Amycolatopsis mediterranei U32. Acta Biochimica et Biophysica Sinica, 50(8):757-765
  34. Shen FZ#, Wu XT#, Shi LX, Zhang H, Chen YM, Qi XQ, Wang Z*, Li X* (2018). Transcriptomic and metabolic flux analyses reveal shift of metabolic patterns during rice grain development. BMC Systems Biology, 12(Suppl 4):47
  35. Shiwen Wu#, Mengquan Yang#, Youli Xiao* (2018). Synthetic Biology Studies of Monoterpene Indole Alkaloids(单萜吲哚生物碱的合成生物学研究进展). Chinese Journal of Organic Chemistry, 2243-2258
  36. Haili Liu, Hengchao E, Dingan Xie, Wenbo Cheng, Wanqi Tao, Yong Wang* (2018). Acylated aminoolisaccharides with inhibitory effects against a-amylase from Streptomyces sp. HO1518. Marine drugs, 16(11):403
  37. Li L, Jiang WH*, Lu YH* (2018). A modified Gibson assembly method for cloning large DNA fragments with high GC Contents. Methods Mol Biol, 1671:203-209
  38. Shiwen Wu, Zhen Fan, Youli Xiao* (2018). Comprehensive relative quantitative metabolomics analysis of lycopodium alkaloids in different tissues of Huperzia serrata. Synthetic and Systems Biotechnology, 3:44-55
 
 
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